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legend  pdf

structure nameBINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA
(PROTEIN LARGE FRAGMENT OF DNA POLYMERASE I)
referenceWaksman et al. 'EMBO 17 7514 1998
sourceThermus aquaticus
experimentX-ray (resolution=2.50, R-factor=0.227)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNEYNQH

Estimated binding specificities ?

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# IC=2.390 IC/col=0.598 n_of_columns=4 specificity:   
A |   7   7   7   1
C |   9  66   7  81
G |  73  14  75   7
T |   7   9   7   7
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updated Sun Jun 28 10:41:18 2026