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legend  pdf

structure nameBINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA
(PROTEIN LARGE FRAGMENT OF DNA POLYMERASE I)
referenceWaksman et al. 'EMBO 17 7514 1998
sourceThermus aquaticus
experimentX-ray (resolution=2.50, R-factor=0.227)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNEYNQH

Estimated binding specificities ?

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# IC=2.756 IC/col=0.689 n_of_columns=4 specificity:   
A |   7  22   8   7
C |   7  53   7  89
G |  75   7  81   0
T |   7  14   0   0
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updated Thu Sep 12 19:43:39 2024