4ktq_A : 3D-footprint complex

structure name	BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA (PROTEIN LARGE FRAGMENT OF DNA POLYMERASE I)
reference	Waksman et al. 'EMBO 17 7514 1998
source	Thermus aquaticus
experiment	X-ray (resolution=2.50, R-factor=0.227)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A; Taq polymerase, exonuclease;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ktq_A interface=247,280,290,322,378,457,461,491, leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlkstyidplpdlihprtgrlhtrfnqtatatgRlsssdpnlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlYgmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake
interface signature	KRNEYNQH

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# IC=2.647 IC/col=0.662 n_of_columns=4

A |   7   9   7   0
C |   9  51   7  89
G |  73  14  81   0
T |   7  22   1   7

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updated Mon Dec 16 23:52:07 2024