4m6f_A : 3D-footprint complex

structure name	DIMER OF THE G-SEGMENT INVERTASE BOUND TO A DNA SUBSTRATE (DNA-INVERTASE)
reference	Ritacco et al. 'Acta 70 685 2014
source	ENTEROBACTERIA PHAGE MU
experiment	X-ray (resolution=4.99, R-factor=0.230)
structural superfamily	Resolvase-like;Homeodomain-like;
sequence family	Resolvase, N terminal domain; Helixturnhelix domain of resolvase;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4m6f_A interface=118,122,126,135,138,139,170,171,172,173,174,176,182,183,185,186,187,188, ligyvrvstndqntdlqrnalvcagceqifedklsgtrtdrpglkralkrlqkgdtlvvwkldrlgrsmkhlislvgelrerginfrsltdsidtsspmgrfffhvmgalaeverelIierTmagLaaarnkgrIggRPpkltkaeqeqagrllaqgiprkqvaliydvALSTLyKkhpakRAhIEND
interface signature	ITLIRPALSTLKRAIEND

Estimated binding specificities ?

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# IC=15.415 IC/col=1.028 n_of_columns=15

specificity:

A |  96   0   0   0  96   0   0  24  80  96  80  76   5  10   0
C |   0  96   0   0   0   0  96  24   5   0   6   0  81  10   0
G |   0   0   0   0   0   0   0  24   6   0   5  10   5   7   0
T |   0   0  96  96   0  96   0  24   5   0   5  10   5  69  96

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updated Fri Sep 13 18:29:54 2024