interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF BACTERIAL POLYNUCLEOTIDE KINASE PRODUCT COMPLEX BOUND TO GDP AND DNA
(METALLOPHOSPHOESTERASE)
referenceJacewicz et al. 'Nucleic 42 1152 2014
sourceCLOSTRIDIUM THERMOCELLUM
experimentX-ray (resolution=1.80, R-factor=0.168)
structural superfamilyP-loop containing nucleoside triphosphate hydrolases;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQTTFHAVYVRH

Estimated binding specificities ?

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# IC=5.330 IC/col=1.333 n_of_columns=4 specificity:   
A |   0   0   0   0
C |  96  96   0   0
G |   0   0   0  96
T |   0   0  96   0
scan!

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updated Tue Dec 19 09:08:11 2023