4ne1_QTUV : 3D-footprint complex

structure name	HUMAN MHF1 MHF2 DNA COMPLEXES
reference	Sachpatzidis et al. 'Nat 5 2987 2014
source	HOMO SAPIENS
experiment	X-ray (resolution=6.50, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ne1_Q interface=97, syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks > 4ne1_T interface=97, syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanleRkaqkkkks > 4ne1_U interface=10,22, sgfrkelvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_V interface=4,6,10, sgfRkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf
interface signature	R/R/RK/RER

Estimated binding specificities ?

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# IC=5.928 IC/col=0.395 n_of_columns=15

specificity:

A |  96  24  48  96  24  24  54  24  24  24  24  54  96  24  96
C |   0  24  18   0  24  24  12  24  24  24  24  18   0  24   0
G |   0  24  18   0  24  24  18  24  24  24  24  12   0  24   0
T |   0  24  12   0  24  24  12  24  24  24  24  12   0  24   0

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updated Fri Dec 13 20:47:41 2024