4ne1_Wknop : 3D-footprint complex

structure name	HUMAN MHF1 MHF2 DNA COMPLEXES
reference	Sachpatzidis et al. 'Nat 5 2987 2014
source	HOMO SAPIENS
experiment	X-ray (resolution=6.50, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ne1_W interface= sgfrkelvsrllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_k interface= syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks > 4ne1_n interface= syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks > 4ne1_o interface=10,22, sgfrkelvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_p interface=4,6,10, sgfRkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf
interface signature	///RK/RER

Estimated binding specificities ?

contact

# IC=4.228 IC/col=0.302 n_of_columns=14

specificity:

A |   0  17  24   1  24  24  24  24  24  24  22  22  24   0
C |   0  19  24   0  24  24  24  24  24  24   0  19  24   0
G |   4  22  24  19  24  24  24  24  24  24   0  17  24   0
T |  92  38  24  76  24  24  24  24  24  24  74  38  24  96

scan!

home
updated Wed Jul 30 02:17:00 2025