4ne1_Wknop : 3D-footprint complex

structure name	HUMAN MHF1 MHF2 DNA COMPLEXES
reference	Sachpatzidis et al. 'Nat 5 2987 2014
source	HOMO SAPIENS
experiment	X-ray (resolution=6.50, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ne1_W interface= sgfrkelvsrllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_k interface= syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks > 4ne1_n interface= syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks > 4ne1_o interface=10,22, sgfrkelvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_p interface=4,6,10, sgfRkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf
interface signature	///RK/RER

Estimated binding specificities ?

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# IC=4.176 IC/col=0.298 n_of_columns=14

specificity:

A |  96  24  59  84  24  24  24  24  24  24  61  24  61  87
C |   0  24  11   6  24  24  24  24  24  24   5  24  19   3
G |   0  24   7   3  24  24  24  24  24  24  15  24   7   3
T |   0  24  19   3  24  24  24  24  24  24  15  24   9   3

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updated Fri Dec 13 20:47:17 2024