4ne1_Wknop : 3D-footprint complex

structure name	HUMAN MHF1 MHF2 DNA COMPLEXES
reference	Sachpatzidis et al. 'Nat 5 2987 2014
source	HOMO SAPIENS
experiment	X-ray (resolution=6.50, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ne1_W interface= sgfrkelvsrllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_k interface= syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks > 4ne1_n interface= syqqrlkaavhytvgclceevaldkamqfskqtiaaiseltfrqcenfakdlemfarhakrttintedvkllarrsnsllkyitdkseeiaqanlerkaqkkkks > 4ne1_o interface=10,22, sgfrkelvsRllhlhfkddktKvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf > 4ne1_p interface=4,6,10, sgfRkElvsRllhlhfkddktkvsgdalqlmvellkvfvveaavrgvrqaqaedalrvdvdqlekvlpqllldf
interface signature	///RK/RER

Estimated binding specificities ?

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# IC=4.468 IC/col=0.319 n_of_columns=14

specificity:

A |  96  24  36  92  24  24  24  24  24  24  67  24  33  96
C |   0  24  18   3  24  24  24  24  24  24   0  24  23   0
G |   0  24  22   0  24  24  24  24  24  24   7  24  22   0
T |   0  24  20   1  24  24  24  24  24  24  22  24  18   0

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updated Mon Sep 9 23:04:22 2024