interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF LIGANDED HRXR-ALPHA/HLXR-BETA HETERODIMER ON DNA
referenceGustafsson et al. Nat.Struct.Mol.Biol. 21 277 2014
sourceHOMO SAPIENS
experimentX-ray (resolution=3.10, R-factor=?)
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureEKKR/PEKRR

Estimated binding specificities ?

readout + contactlogo
# IC=11.410 IC/col=0.713 n_of_columns=16 specificity:   
A |  78   0   0   6  24  96  24  24  24  24  78   6   0   6   0  96
C |   6   0   0   6  24   0  24  24  24  24   6   6   0   6  96   0
G |   6  96  96   6  24   0  24  24  24  24   6  78  96   6   0   0
T |   6   0   0  78  24   0  24  24  24  24   6   6   0  78   0   0
scan!

home
updated Mon Sep 9 23:05:49 2024