4on0_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF NOLR FROM SINORHIZOBIUM FREDII IN COMPLEX WITH OLIGO AA DNA
reference	Krishnan et al. Proc.Natl.Acad.Sci.USA 111 6509 2014
source	SINORHIZOBIUM FREDII
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4on0_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4on0_C interface=50,52,53,55,56,60, qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglSqSAlSQhlsKlraqnlvstrrdaqtiyyssssdsvmkilgalseiyg > 4on0_D interface=51,52,53,55,56,74, qplspekheeaeiaagflsamanpkrllildslvkeemavgalankvglsQSAlSQhlsklraqnlvstrrdaQtiyyssssdsvmkilgalseiyg
interface signature	SSASQK/QSASQQ

Estimated binding specificities ?

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# IC=9.207 IC/col=0.575 n_of_columns=16

specificity:

A |   9   0  96   0  24  24  24  24  24  24   0   0   7  67   0   7
C |   9   4   0   0  24  24  24  24  24  24  86   0   4  16   0   9
G |  16   4   0  96  24  24  24  24  24  24   0   0  28   4   0  76
T |  62  88   0   0  24  24  24  24  24  24  10  96  57   9  96   4

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updated Wed Jun 24 22:18:08 2026