interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A COMPLEX BETWEEN AN INHIBITED LLFPG AND A N7- BENZYL-FAPY-DG CONTAINING DNA
(Formamidopyrimidine-DNA glycosylase)
referenceCastaing et al. 'Nucleic 42 10748 2014
sourceLactococcus lactis subsp. cremoris
experimentX-ray (resolution=2.10, R-factor=0.162)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
multimeric complexes4cis_AB
reference complex6fl1_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRMRFR

Estimated binding specificities ?

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# IC=4.048 IC/col=1.012 n_of_columns=4 specificity:   
A |  38  96   0  96
C |  19   0  96   0
G |  19   0   0   0
T |  20   0   0   0
scan!

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updated Mon Dec 18 11:08:19 2023