legend  pdf

interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

home
updated Mon Dec 18 11:08:24 2023

structure name	STRUCTURE OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH G IN THE TEMPLATE BASE PAIRED WITH INCOMING NON-HYDROLYZABLE TTP (DNA polymerase beta)
reference	Koag et al. 'Nucleic 42 11233 2015
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=0.206)
structural superfamily	Nucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;PsbU/PolX domain-like;
sequence family	Fingers domain of DNA polymerase lamb;
reference complex	4kli_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4pgq_A interface=26,27,30, etlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskdekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse