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interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'Nucleic acid-binding proteins', as they bind to single-stranded DNA and thus accumulate more base contacts.

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updated Mon Jan 5 10:47:30 2026

structure name	MCM-SSDNA CO-CRYSTAL STRUCTURE
reference	Froelich et al. Elife 3 e01993 2014
source	Pyrococcus furiosus
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	Nucleic acid-binding proteins;
reference complex	4pog_H
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4pog_B interface=125,187,200,202,203, svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgeikpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggeMpRFidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk > 4pog_C interface=125,128,130,187,202,203,234,242, svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtRvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfRiqdrpetlkggempRFidgillddivdvalpgdrvivtgilrvvleKrektpifRkilevnhiepvsk > 4pog_D interface=128,130, svdreemierfanflreytdedgnpvyrgkitdlltitpkrsvaidwmhlnsfdselahevienpeegisaaedaiqivlredfqredvgkiharfynlpetlmvkdigaehinkliqvegivtrvgEiKpfvsvavfvckdcghemivpqkpyeslekvkkceqcgsknieldvnkssfvnfqsfriqdrpetlkggemprfidgillddivdvalpgdrvivtgilrvvlekrektpifrkilevnhiepvsk