interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF GLNR-DNA COMPLEX
(HTH-type transcriptional regulator GlnR)
reference'Genes 29 451 2015
sourceBacillus subtilis subsp. subtilis
experimentX-ray (resolution=2.57, R-factor=0.254)
structural superfamilyPutative DNA-binding domain;
sequence familyMerR family regulatory protein;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRR

Estimated binding specificities ?

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# IC=4.475 IC/col=0.639 n_of_columns=7 specificity:   
A |  16   0  24  13  24  96   0
C |  13   0  24  13  24   0  96
G |  13   0  24  13  24   0   0
T |  54  96  24  57  24   0   0
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Dendrogram of similar interfaces ?

matrix format

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updated Mon Jun 29 18:34:05 2026