4rkh_CDEF : 3D-footprint complex

structure name	STRUCTURE OF THE MSL2 CXC DOMAIN BOUND WITH A SPECIFIC MRE SEQUENCE
reference	Zheng et al. 'Genes 28 2652 2014
source	Drosophila melanogaster
experiment	X-ray (resolution=2.00, R-factor=?)
reference complex	4rkh_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4rkh_C interface=5,9,20, kpkcRcgiSsntlttcrnsRcpcyksynscagchcvgcknphkedyv > 4rkh_D interface=8,24, sppkpkcRcgisssntlttcrnsRcpcyksynscagchcvgcknphkedyv > 4rkh_E interface=8,25, sppkpkcRcgisgssntlttcrnsRcpcyksynscagchcvgcknphkedy > 4rkh_F interface=5,8,9,20, kpkcRcgISsntlttcrnsRcpcyksynscagchcvgcknphkedy
interface signature	RSR/RR/RR/RISR

Estimated binding specificities ?

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# IC=10.041 IC/col=0.772 n_of_columns=13

specificity:

A |  16   2  20  24  24   0   0   0   8   0   8  96   0
C |  76  94  16  24  24   0  96   3  46  73  65   0   0
G |   2   0  52  24  24   0   0  93  16   2   7   0   0
T |   2   0   8  24  24  96   0   0  26  21  16   0  96

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updated Mon Jan 5 11:02:52 2026