legend  pdf

interface graphfootprint logoatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

home
updated Mon Dec 18 11:18:39 2023

structure name	HUMAN DNA POLYMERASE BETA WITH GAPPED DNA CONTAINING AN 8-OXO-7,8- DIHYDRO-GUANINE (8-OXOG)AND DCTP SOAKED WITH MNCL2 FOR 35 S (DNA polymerase beta)
reference	Reed et al. J.Am.Chem.Soc. 137 5225 2015
source	Homo sapiens
experiment	X-ray (resolution=2.20, R-factor=0.198)
structural superfamily	Nucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;PsbU/PolX domain-like;
sequence family	Fingers domain of DNA polymerase lamb;
reference complex	4kli_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4rq2_A interface=221,226,263,268,271,275,287, etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlSkgetKfmgvcqlpskndekeyphrridirlipkdqyycgvlYftgsDifNknmRahalekgftinEytirplgvtgvageplpvdsekdifdyiqwkyrepkdrsehhhhhh