4s0h_AB : 3D-footprint complex

structure name	TBX5 DB, NKX2.5 HD, ANF DNA COMPLEX
reference	Biochemistry 55 1702 2016
source	HOMO SAPIENS
experiment	X-ray (resolution=2.82, R-factor=?)
structural superfamily	p53-like transcription factors;Homeodomain-like;
reference complex	2x6v_A 3rkq_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4s0h_A interface=29,153,170,174, gikvflherelwlkfhevgtemiitkagRrmfpsykvkvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkatafcthvfpetafiavTsyqnhkitqlkiennpFakgFrg > 4s0h_B interface=1,43,46,47,50, RvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYksk
interface signature	RTFF/RIQNY

Estimated binding specificities ?

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# IC=7.346 IC/col=0.565 n_of_columns=13

specificity:

A |   0  24   0   0  13  13  24  24  24  24   6  16   0
C |  96  24  96   0   6  77  24  24  24  24  13  13   0
G |   0  24   0   0   6   6  24  24  24  24  64   6  96
T |   0  24   0  96  71   0  24  24  24  24  13  61   0

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updated Mon Sep 9 23:37:26 2024