4s0h_EF : 3D-footprint complex

structure name	TBX5 DB, NKX2.5 HD, ANF DNA COMPLEX
reference	Biochemistry 55 1702 2016
source	HOMO SAPIENS
experiment	X-ray (resolution=2.82, R-factor=?)
structural superfamily	p53-like transcription factors;Homeodomain-like;
reference complex	2x6v_A 3rkq_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4s0h_E interface=29,154,171,175, gikvflherelwlkfhevgtemiitkagRrmfpsykvkvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkadtafcthvfpetafiavTsyqnhkitqlkiennpFakgFrg > 4s0h_F interface=43,46,47,50, rvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYksk
interface signature	RTFF/IQNY

Estimated binding specificities ?

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# IC=8.472 IC/col=0.652 n_of_columns=13

specificity:

A |   0  54   0   0   0  24  24  24  24  24  13   0   0
C |  96  16  96   0   0  24  24  24  24  24  13   0   0
G |   0  13   0   0   0  24  24  24  24  24  57   0  96
T |   0  13   0  96  96  24  24  24  24  24  13  96   0

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updated Mon Sep 9 23:37:35 2024