4s0h_EF : 3D-footprint complex

structure name	TBX5 DB, NKX2.5 HD, ANF DNA COMPLEX
reference	Biochemistry 55 1702 2016
source	HOMO SAPIENS
experiment	X-ray (resolution=2.82, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4s0h_E interface=29,154,171,175, gikvflherelwlkfhevgtemiitkagRrmfpsykvkvtglnpktkyillmdivpaddhrykfadnkwsvtgkaepampgrlyvhpdspatgahwmrqlvsfqklkltnnhldpfghiilnsmhkyqprlhivkadtafcthvfpetafiavTsyqnhkitqlkiennpFakgFrg > 4s0h_F interface=43,46,47,50, rvlfsqaqvyelerrfkqqrylsaperdqlasvlkltstqvkIwfQNrrYksk
interface signature	RTFF/IQNY

Estimated binding specificities ?

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# IC=7.965 IC/col=0.613 n_of_columns=13

specificity:

A |   0  96  11  24  24  24  24  24  67  96   0  11   0
C |  96   0  67  24  24  24  24  24  11   0   0   9   0
G |   0   0   9  24  24  24  24  24   9   0  96   9  96
T |   0   0   9  24  24  24  24  24   9   0   0  67   0

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updated Fri Dec 13 21:23:54 2024