4x4b_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 2.1 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4b_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4b_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4b_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4b_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

readout + contact

# IC=23.247 IC/col=0.704 n_of_columns=33

specificity:

A |   0   0   0  24   0  92   1  24  24  24  24   0  24   0  90   1  35   4  24   0  63  24  24  24  24  24  96   0   0   9  95   0  96
C |   0   0   0  24   0   1  67  24  24  24  24   2  24  96   1  80   0  90  24   0   5  24  24  24  24  24   0   0   0  61   0  96   0
G |   0  96   0  24  96   1  13  24  24  24  24   0  24   0   2  15  61   1  24  96  15  24  24  24  24  24   0  96   0  11   0   0   0
T |  96   0  96  24   0   2  15  24  24  24  24  94  24   0   3   0   0   1  24   0  13  24  24  24  24  24   0   0  96  15   1   0   0

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updated Fri Dec 13 21:51:57 2024