4x4c_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 6.2 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4c_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4c_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4c_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4c_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

readout + contact

# IC=23.383 IC/col=0.709 n_of_columns=33

specificity:

A |   0   0   2  24   0  90   5  24  24  24  24   0  24   0  90   0  13   1  24   0  69  24  24  24  24  24  94   0   0   7  93   0  96
C |   0   0   1  24   0   1  71  24  24  24  24   0  24  96   1  84   1  90  24   0   7  24  24  24  24  24   0   0   0  67   1  96   0
G |   0  96   1  24  96   4   7  24  24  24  24   0  24   0   4  11  82   1  24  96   9  24  24  24  24  24   1  96   0  11   1   0   0
T |  96   0  92  24   0   1  13  24  24  24  24  96  24   0   1   1   0   4  24   0  11  24  24  24  24  24   1   0  96  11   1   0   0

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updated Fri Dec 13 21:52:20 2024