4x4g_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 26.8 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	3s8q_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4g_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4g_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4g_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4g_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

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# IC=23.338 IC/col=0.707 n_of_columns=33

specificity:

A |   0   0   1  13  96   0   0  24  24  24  24  24   3   0  24   0   0   0   1   1  24  92  24  24  24  24  11   0   0  24  96   0  96
C |   0   0   3   5   0  96   5  24  24  24  24  24  11  96  24   0  69   3   2   0  24   1  24  24  24  24  21   5  96  24   0  96   0
G |   0  96   0  72   0   0   3  24  24  24  24  24  25   0  24  96   0  92   1  94  24   0  24  24  24  24  61   1   0  24   0   0   0
T |  96   0  92   6   0   0  88  24  24  24  24  24  57   0  24   0  27   1  92   1  24   3  24  24  24  24   3  90   0  24   0   0   0

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updated Wed Jun 24 23:16:32 2026