4x4h_ABCD : 3D-footprint complex

structure name	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.ESP1396I: DOSE (DWD) 35.7 MGY
reference	McGeehan et al.
source	Enterobacter sp. RFL1396
experiment	X-ray (resolution=2.80, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4x4h_A interface=24,33,34,35,38,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTyiSgiernsRnltikslelimkglevsdvvffemlikeilk > 4x4h_B interface=33,34,35,36,38,42, esfllskvsfvikkirlekgmtqedlayksnlDRTYiSgieRnsrnltikslelimkglevsdvvffemlikeilkh > 4x4h_C interface=23,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtQedlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilkh > 4x4h_D interface=24,33,34,35,36,38,42,45, esfllskvsfvikkirlekgmtqEdlayksnlDRTYiSgieRnsRnltikslelimkglevsdvvffemlikeilk
interface signature	EDRTSR/DRTYSR/QDRTYSRR/EDRTYSRR

Estimated binding specificities ?

readout + contact

# IC=22.969 IC/col=0.696 n_of_columns=33

specificity:

A |   0   0   1   9  96   0   3  24  24  24  24  24   3   1  24   4   0   0   1   1  24  91  24  24  24  24   9   0   2  24  92   0  96
C |   0   0   1   6   0  96   0  24  24  24  24  24   7  92  24   1  82   7   1   3  24   1  24  24  24  24   9   3  94  24   2  96   0
G |   0  96   4  76   0   0   3  24  24  24  24  24  13   1  24  90   1  88   2  92  24   1  24  24  24  24  74   3   0  24   1   0   0
T |  96   0  90   5   0   0  90  24  24  24  24  24  73   2  24   1  13   1  92   0  24   3  24  24  24  24   4  90   0  24   1   0   0

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updated Fri Dec 13 21:54:35 2024