interface graph thumbnail
legend  pdf

structure nameANTPHD WITH 15BP DI-THIOATE MODIFIED DNA DUPLEX
(Homeotic protein antennapedia)
referenceZandarashvili et al.
sourceDrosophila melanogaster
experimentX-ray (resolution=2.69, R-factor=0.219)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRIQN

Estimated binding specificities ?

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# IC=5.300 IC/col=0.883 n_of_columns=6 specificity:   
A |   9  67   0   0  67   0
C |  67   9   0   0   9   0
G |   9   9   0   0   9  96
T |  11  11  96  96  11   0
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updated Tue Dec 17 00:26:44 2024