4xr3_A : 3D-footprint complex

structure name	ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH DNA- GC(6) SWAPPED. (DNA replication terminus site-binding protein)
reference	Nature 525 394 2015
source	Escherichia coli (strain K12) / Escherichia coli (strain K12)
experiment	X-ray (resolution=2.70, R-factor=0.213)
structural superfamily	Replication terminator protein Tus;
sequence family	DNA replication terminus sitebinding protei;
reference complex	2i06_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4xr3_A interface=85,89,132,133,149,169,171,173,174,194,228,230,233,235,237,246,248,250,284,285, dlvdrlnttfrqmeqelaifaahleqhkllvarvfslpevkkedehnplnrievkqhlgndaqslalrhfrhlfiqqqsenrssKaavRlpgvlcyqvdnlsqaalvshiqhinklkttfehivtveselpTAarfewvhrhlpglitLnayrtltvlhdpatlrfgwAnKhIIknlhrdevlaqlekslkspRsvapwtreewqrklereyqdiaalpqnaklkikRpVkvQpIaRvwykgdqkQvQhAcptplialinrdngagvpdvgellnydadnvqhRYkpqaqplrliiprlhlyvad
interface signature	KRTALAKIIRRVQIRQQARY

Estimated binding specificities ?

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# IC=13.749 IC/col=0.982 n_of_columns=14

specificity:

A |  96   0   0   0  96   1  67  63   0  96   1  24   7  85
C |   0   0   0   0   0  90  11  11  96   0   5  24  11   0
G |   0  96   0   0   0   0   5  11   0   0   0  24  67   0
T |   0   0  96  96   0   5  13  11   0   0  90  24  11  11

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updated Tue Dec 17 00:30:14 2024