5ay8_E : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CONTAINING H3.Y (H3.Y)
reference	Kurumizaka et al. 'Nucleic 44 6127 2016
source	HOMO SAPIENS
experiment	X-ray (resolution=2.80, R-factor=0.203)
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	5ay8_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ay8_E interface=2,3,28,46, pHRykpgtlalreirkyqkstqlllrkLpfqrlvreiaqaispdlRfqsaaigalqeaseaylvqlfedtnlcaiharrvtimprdmqlarrlrre

  
  RG----       +-----------------------------8jh2_e    
               ! 
  RGLC--     --3                   +---------8bvw_e    
               !         +---------1 
  ----RT       +---------2         +---------8u14_G    
                         ! 
  ----RG                 +-------------------8txv_G

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updated Fri Sep 13 19:07:04 2024