5bmz_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR HCAR FROM ACINETOBACTER SP. ADP COMPLEXED WITH 24MER DNA.
reference	Midwest Center for Structural Genomics (MCSG)
experiment	X-ray (resolution=3.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5bmz_A interface=49,59,60,61,62,64,87, eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfiKPQSaNkilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst > 5bmz_B interface=49,59,60,61,62,64,65,87, eeeprlsymiarvdriiskyltehlsaleislpqftalsvlaakpnlsNaklaersfiKPQSaNKilqdllangwiekapdpthgrRilvtvtpsgldklnqcnqvvqqleaqmlqgvdinlaflirnnlelmvknlst
interface signature	NKPQSNR/NKPQSNKR

Estimated binding specificities ?

readout + contact

# IC=13.580 IC/col=0.715 n_of_columns=19

specificity:

A |  86   4  24   0   0  96   9   0  24  24  24  24   9   0   4  96  24  81   0
C |   0   4  24   0  96   0  11   0  24  24  24  24  72   0   7   0  24   4   0
G |   6   7  24   0   0   0  67   0  24  24  24  24  11   0  81   0  24   7   0
T |   4  81  24  96   0   0   9  96  24  24  24  24   4  96   4   0  24   4  96

scan!

home
updated Mon Jan 5 14:45:44 2026