5byg_AB : 3D-footprint complex

structure name	X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1
reference	Escalante et al. J.Biol.Chem. 290 27487 2015
source	Adeno-associated virus 2
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Origin of replication-binding domain, RBD-like;
reference complex	7jse_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5byg_A interface=83,87,118,121, mpgfyeivikvpsewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqe > 5byg_B interface=97,101,132,135, mpgfyeivikvpsdgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq
interface signature	MRRA/MRRA

Estimated binding specificities ?

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# IC=9.170 IC/col=0.764 n_of_columns=12

specificity:

A |   2  65  24   8  18  96   0   0  19  24  13   0
C |   5  10  24  83   2   0   0  96  10  24  13  96
G |  87   5  24   0  74   0  96   0  65  24  65   0
T |   2  16  24   5   2   0   0   0   2  24   5   0

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updated Mon Jan 5 15:00:24 2026