5byg_AB : 3D-footprint complex

structure name	X-RAY STRUCTURE OF AAV2 OBD-AAVS1 COMPLEX 2:1
reference	Escalante et al. J.Biol.Chem. 290 27487 2015
source	Adeno-associated virus 2
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Origin of replication-binding domain, RBD-like;
reference complex	7jse_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5byg_A interface=83,87,118,121, mpgfyeivikvpsewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqe > 5byg_B interface=97,101,132,135, mpgfyeivikvpsdgisdsfvnwvaekewelppdsdmdlnlieqapltvaeklqrdfltewrrvskapealffvqfekgesyfhmhvlvettgvksMvlgRflsqirekliqriyrgieptlpnwfavtktRngAgggnkvvdesyipnfllpktqpelqwawtnmeqylsaclnlterkrlvaqhlthvsqtqeqnkenq
interface signature	MRRA/MRRA

Estimated binding specificities ?

readout + contact

# IC=9.336 IC/col=0.778 n_of_columns=12

specificity:

A |   0  69  24  13  14  93   0   0  10  24  14   0
C |   3  12  24  64   0   1   0  96  13  24  10  96
G |  93  13  24   9  80   2  96   0  71  24  72   0
T |   0   2  24  10   2   0   0   0   2  24   0   0

scan!

home
updated Thu Jun 25 02:29:55 2026