5ciz_A : 3D-footprint complex

structure name	E. COLI RNA POLYMERASE ALPHA SUBUNIT CTD IN COMPLEX WITH CAP AND DNA: A(5)-TRACT BINDING SITE FOR ALPHA CTD (CAMP-ACTIVATED GLOBAL TRANSCRIPTIONAL REGULATOR CRP)
reference	Napoli et al. Biochemistry ? ? 2020
source	ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12)
experiment	X-ray (resolution=5.01, R-factor=0.182)
structural superfamily	cAMP-binding domain-like;"Winged helix" DNA-binding domain;
sequence family	Cyclic nucleotidebinding domain; Bacterial regulatory proteins, crp famil;
multimeric complexes	1lb2_ABE 3iyd_ACDFGH 3n4m_ABC 5ciz_AB 6pb4_CDFGH 6pb5_CFGH 6pb6_CDFGH
reference complex	3n4m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ciz_A interface=164,173,174,175,179, tdptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgdfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvtsekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrQeigqivgcSREtvgRilkmledqnlisahgktivvygtr
interface signature	QSRER

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# IC=4.516 IC/col=0.903 n_of_columns=5

A |   0   0  57  13  96
C |   0  96  13  57   0
G |   0   0  13  13   0
T |  96   0  13  13   0

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updated Thu Sep 12 20:57:34 2024