5cm3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF KORA, A PLASMID-ENCODED, GLOBAL TRANSCRIPTION REGULATOR
reference	Rajasekar et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
reference complex	2w7n_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5cm3_A interface=47,48,50,52,53,57, mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq > 5cm3_B interface=47,48,50,52,53,57, mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweada
interface signature	TRASQR/TRASQR

Estimated binding specificities ?

readout + contact

# IC=11.369 IC/col=0.875 n_of_columns=13

specificity:

A |   0   7  24   0  96   0   0   0  89  24  70   0  15
C |   0  19  24   0   0   0  96   0   1  24   6  96  12
G |  96  19  24   0   0  96   0   0   6  24  12   0  12
T |   0  51  24  96   0   0   0  96   0  24   8   0  57

scan!

home
updated Thu Jun 25 02:44:44 2026