5cm3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF KORA, A PLASMID-ENCODED, GLOBAL TRANSCRIPTION REGULATOR
reference	Rajasekar et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
reference complex	2w7n_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5cm3_A interface=47,48,50,52,53,57, mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq > 5cm3_B interface=47,48,50,52,53,57, mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweada
interface signature	TRASQR/TRASQR

Estimated binding specificities ?

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# IC=9.764 IC/col=0.814 n_of_columns=12

specificity:

A |   0  16  24  16  96   0   0   0  96  24  24   0
C |   0  13  24  13   0   0  96   0   0  24  24  96
G |  96  13  24  13   0  96   0   0   0  24  24   0
T |   0  54  24  54   0   0   0  96   0  24  24   0

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updated Tue Sep 10 03:00:17 2024