5cm3_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF KORA, A PLASMID-ENCODED, GLOBAL TRANSCRIPTION REGULATOR
reference	Rajasekar et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
reference complex	2w7n_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5cm3_A interface=47,48,50,52,53,57, mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweadakkkq > 5cm3_B interface=47,48,50,52,53,57, mkkrltesqfqeaiqglevgqqtieiargvlvdgkpqatfatslglTRgAvSQavhRvwaafedknlpegyarvtavlpehqayivrkweada
interface signature	TRASQR/TRASQR

Estimated binding specificities ?

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# IC=11.296 IC/col=0.869 n_of_columns=13

specificity:

A |   0   7  24   0  96   0   0   0  88  24  59   0   9
C |   0  14  24   0   0   0  96   0   0  24  14  96  14
G |  96  14  24   0   0  96   0   0   7  24  14   0  14
T |   0  61  24  96   0   0   0  96   1  24   9   0  59

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updated Mon Jan 5 15:15:58 2026