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legend  pdf

structure nameCRYSTAL STRUCTURE OF CHAETOMIUM THERMOPHILUM SKN7 WITH SSRE DNA
(Putative transcription factor)
referenceHayer-Hartl et al. Nat.Struct.Mol.Biol. 23 140 2016
sourceChaetomium thermophilum
experimentX-ray (resolution=2.40, R-factor=0.231)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyHSFtype DNAbinding;
multimeric complexes5d5x_BE
reference complex5d5w_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSRNKR

Estimated binding specificities ?

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# IC=5.339 IC/col=0.890 n_of_columns=6 specificity:   
A |   9  96   0   0   9  67
C |  67   0   0  96  69   9
G |   9   0  96   0   9   9
T |  11   0   0   0   9  11
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updated Thu Sep 12 21:04:59 2024