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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 5-(N-(10- HYDROXYDECANOYL)-AMINOPENTENYL)-2'-DEOXYURIDINE-TRIPHOSPHATE
(DNA polymerase I, thermostable)
referenceHottin et al. Chemistry 23 2109 2017
sourceThermus aquaticus
experimentX-ray (resolution=1.80, R-factor=0.194)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNQH

Estimated binding specificities ?

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# IC=2.791 IC/col=0.698 n_of_columns=4 specificity:   
A |  19   0   0  11
C |   9  76   0  67
G |  59  11  96   9
T |   9   9   0   9
scan!

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updated Fri Jan 9 03:10:29 2026