interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH 5-(N-(10- HYDROXYDECANOYL)-AMINOPENTENYL)-2'-DEOXYURIDINE-TRIPHOSPHATE
(DNA polymerase I, thermostable)
referenceHottin et al. Chemistry 23 2109 2017
sourceThermus aquaticus
experimentX-ray (resolution=1.80, R-factor=0.194)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNQH

Estimated binding specificities ?

readout + contactlogo
# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |   9   0  11   9
C |  11  96   9  69
G |  67   0  67   9
T |   9   0   9   9
scan!

home
updated Thu Sep 12 21:10:25 2024