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structure nameHUMAN PRDM9 ALLELE-A ZNF DOMAIN WITH ASSOCIATED RECOMBINATION HOTSPOT DNA SEQUENCE II
(Histone-lysine N-methyltransferase PRDM9)
referenceHorton et al. 'Genes 30 257 2016
sourceHomo sapiens
experimentX-ray (resolution=1.98, R-factor=0.194)
structural superfamilybeta-beta-alpha zinc fingers;
sequence familyZinc finger, C2H2 type;
reference complex5ei9_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSNSHRDSHRRRDSNNKSHR

Estimated binding specificities ?

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# IC=14.910 IC/col=1.147 n_of_columns=13 specificity:   
A |   0   0   0  12   0   0   0   0  84   0   0   0  60
C |   0  96  96  12  96  96  96   0   0   0  96  96  12
G |  96   0   0  12   0   0   0   0  12  96   0   0  12
T |   0   0   0  60   0   0   0  96   0   0   0   0  12
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updated Thu Sep 12 21:12:46 2024