5emq_AB : 3D-footprint complex

structure name	TRANSCRIPTION FACTOR GRDBD AND GRE COMPLEX
reference	Lian et al. 'To ? ? ?
source	Homo sapiens
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	5emc_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5emq_A interface=24,25,29, klclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnl > 5emq_B interface=25,26,30, pklclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnle
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=8.408 IC/col=0.647 n_of_columns=13

specificity:

A |   0  24  54   0  70  24  24  24   0   0   0  24   0
C |   0  24  16  96  13  24  24  24   0   0   0  24  82
G |  96  24  13   0  13  24  24  24   0  96   0  24   0
T |   0  24  13   0   0  24  24  24  96   0  96  24  14

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updated Tue Sep 10 03:46:24 2024