structure name | SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, 35 STRUCTURES (NITROGEN REGULATORY PROTEIN AREA) |
source | EMERICELLA NIDULANS |
experiment | NMR |
structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
sequence family | GATA zinc finger; |
redundant complexes | 7gat 6gat 4gat |
reference complex | 4gat_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | LRLFLR |
Estimated binding specificities ?
contact |
A | 13 0 54 0 C | 54 0 13 0 G | 16 96 13 0 T | 13 0 16 96scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: AREA | ||
CGATAGAGAGATAA | PubMed | 5gat_A(1.03e-02) |
term: CGATA | ||
CGATA | PubMed | 5gat_A(1.38e-04) |
CAATCA | PubMed | 6gat_A(8.80e-07), 7gat_A(3.65e-04) |
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updated Thu Sep 12 21:19:42 2024