| structure name | SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, 35 STRUCTURES (NITROGEN REGULATORY PROTEIN AREA) |
| source | EMERICELLA NIDULANS |
| experiment | NMR |
| structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | GATA zinc finger; |
| redundant complexes | 7gat 6gat 4gat |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | LRLFLR |
Estimated binding specificities ?
| contact |  |
A | 13 0 54 0 C | 54 0 13 0 G | 13 96 16 0 T | 16 0 13 96scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: AREA | ||
| CGATAGAGAGATAA | PubMed | 5gat_A(1.03e-02) |
| term: CGATA | ||
| CGATA | PubMed | 5gat_A(1.38e-04) |
| CAATCA | PubMed | 6gat_A(8.80e-07), 7gat_A(3.65e-04) |
home
updated Tue Dec 17 01:44:25 2024