5h1c_ABC : 3D-footprint complex

structure name	HUMAN RAD51 POST-SYNAPTIC COMPLEXES
source	HOMO SAPIENS
experiment	NMR
structural superfamily	P-loop containing nucleoside triphosphate hydrolases;Rad51 N-terminal domain-like;
reference complex	7c9a_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5h1c_A interface=214,217,249,252,253,258, pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLsarqmhlarflrmllrladefgvavvitnqvVaqVDgaadPkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd > 5h1c_B interface=214,217,218,252,253,258, pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvvaqVDgaadPkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd > 5h1c_C interface=214,217,218,249,252,253, pqpisrleqcginandvkkleeagfhtveavayapkkelinikgiseakadkilaeaaklvpmgfttatefhqrrseiiqittgskeldkllqggietgsitemfgefrtgktqichtlavtcqlpidrgggegkamyidtegtfrperllavaeryglsgsdvldnvayarafntdhqtqllyqasammvesryallivdsatalyrtdysgRgeLSarqmhlarflrmllrladefgvavvitnqvVaqVDgaadpkkpiggniiahasttrlylrkgrgetricqiydspclpeaeamfainadgvgd
interface signature	RLVVDP/RLSVDP/RLSVVD

Estimated binding specificities ?

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# IC=7.140 IC/col=0.793 n_of_columns=9

specificity:

A |  96  24  96  96  24  96  96  54  57
C |   0  24   0   0  24   0   0  16  13
G |   0  24   0   0  24   0   0  13  13
T |   0  24   0   0  24   0   0  13  13

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updated Sat Dec 14 02:40:52 2024