legend  pdf

interface graphfootprint logointerface matrixatomic interactionsinterface residue numbers

3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.

home
updated Mon Dec 18 13:03:59 2023

structure name	BINARY COMPLEX CRYSTAL STRUCTURE OF DNA POLYMERASE BETA WITH G:G MISMATCH AT THE PRIMER TERMINUS (DNA polymerase beta)
reference	Wilson et al. Structure 24 1863 2016
source	Homo sapiens
experiment	X-ray (resolution=2.10, R-factor=0.212)
structural superfamily	Nucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;PsbU/PolX domain-like;
sequence family	Fingers domain of DNA polymerase lamb;
reference complex	4kli_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5j0u_A interface=29,30,33, apqetlnggitdmltelanfeknvsqaiHKynAyrkaasviakyphkiksgaeakklpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftseskllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepkdrse