structure nameCRYSTAL STRUCTURE OF THE MITOCHONDRIAL DNA PACKAGING PROTEIN ABF2P IN COMPLEX WITH DNA AT 2.6 ANGSTROM RESOLUTION
referenceChakraborty et al. 'Nucleic 45 951 2017
sourceSaccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c) / Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
experimentX-ray (resolution=2.60, R-factor=?)
structural superfamilyHMG-box;
reference complex5jh0_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
interface signature///

Estimated binding specificities ?

contactlogo
# IC=48.983 IC/col=0.590 n_of_columns=83 specificity:   
A |   0  24  96   0  96   0  87  24  24  24  24  24  87   3  96  96  96  24  24  24  24  78   0  24  96   0  96   0  87  24  24  24  24  24  24   0  96  96  96  24  24  24  24  75   0  24  96   0  87   0  24  24  24  24  24  24  24   3  96  96  96  24  24  24  24  24   0  24  96   0  78  24  24  24  24  24  24  24  24   0  96  96  96
C |   0  24   0   0   0   0   3  24  24  24  24  24   3   3   0   0   0  24  24  24  24   6   0  24   0   0   0   0   3  24  24  24  24  24  24   0   0   0   0  24  24  24  24   6   0  24   0   0   3   0  24  24  24  24  24  24  24   3   0   0   0  24  24  24  24  24   0  24   0   0   6  24  24  24  24  24  24  24  24   0   0   0   0
G |   0  24   0   0   0   0   3  24  24  24  24  24   3   3   0   0   0  24  24  24  24   6   0  24   0   0   0   0   3  24  24  24  24  24  24   0   0   0   0  24  24  24  24   9   0  24   0   0   3   0  24  24  24  24  24  24  24   3   0   0   0  24  24  24  24  24   0  24   0   0   6  24  24  24  24  24  24  24  24   0   0   0   0
T |  96  24   0  96   0  96   3  24  24  24  24  24   3  87   0   0   0  24  24  24  24   6  96  24   0  96   0  96   3  24  24  24  24  24  24  96   0   0   0  24  24  24  24   6  96  24   0  96   3  96  24  24  24  24  24  24  24  87   0   0   0  24  24  24  24  24  96  24   0  96   6  24  24  24  24  24  24  24  24  96   0   0   0
scan!

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updated Sat Dec 16 03:00:17 2023