5nkl_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE ARTIFICIAL BASE PAIR DDS-DPXTP (DNA polymerase I, thermostable)
reference	Diederichs et al. 'Angew. 56 12000 2017
source	Thermus aquaticus
experiment	X-ray (resolution=1.70, R-factor=0.183)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A; Taq polymerase, exonuclease;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5nkl_A interface=248,252,281,288,291,323,458,462,492, aleeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqiElrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafNmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake
interface signature	KTRNNENQH

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# IC=2.794 IC/col=0.698 n_of_columns=4

A |  11   0   9  11
C |   9  96   9  57
G |  76   0  69  19
T |   0   0   9   9

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updated Tue Dec 17 02:22:13 2024