interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE HETERODIMERIC NPAS3-ARNT COMPLEX WITH HRE DNA
(NEURONAL PAS DOMAIN-CONTAINING PROTEIN 3)
referenceRastinejad et al. Elife 5 ? 2016
sourceMUS MUSCULUS
experimentX-ray (resolution=4.20, R-factor=0.276)
structural superfamilyPYP-like sensor domain PAS domain;HLH, helix-loop-helix DNA-binding domain;
sequence familyPAS fold; Helixloophelix DNAbinding domain;
multimeric complexes5sy7_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --ST----AT--RTRG           +----------------------5sy7_B    
                         +---4 
  --NTNGRTECRGRC--   L   !   +----------------------6od3_F    
                         ! 
  --HGNTMTEA--RCRG   L --5                          +1nlw_D    
                         !                  +-------1 
  --HGNT--EC--RCRG   L   !                  !       +1nkp_A    
                         +------------------3 
  RT--NTRGEC--RCQT                          !   +---2ypa_A    
                                            +---2 
  --HGSTITET--RCRG   L                          +---4h10_A    
                       

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updated Fri Sep 13 20:25:26 2024