5t1j_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TBOX DNA BINDING DOMAIN OF THE TRANSCRIPTION FACTOR T-BET (T-BOX TRANSCRIPTION FACTOR TBX21)
reference	Glimcher et al. Proc.Natl.Acad.Sci.USA 113 E6572 2016
source	MUS MUSCULUS
experiment	X-ray (resolution=2.95, R-factor=0.267)
structural superfamily	p53-like transcription factors;
sequence family	Tbox;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5t1j_B interface=29,168,185,189, klrvalsnhllwskfnqhqtemiitkqgRrmfpflsftvagleptshyrmfvdvvlvdqhhwryqsgkwvqcgkaegsmpgnrlyvhpdspntgahwmrqevsfgklkltnnkgasnnvtqmivlqslhkyqprlhivevndgepeaacsasnthvftfqetqfiavTayqnaeitqlkidnnpFakgFren

No structural evidence for specific binding to DNA (<4 informative columns)

Dendrogram of similar interfaces ?

matrix format

  
  RGTT--FG--FT                  +-5t1j_B    
                     +----------3 
  RGTTATFG--FG       !          +-4a04_B    
                     ! 
  RGTTATFT--FG     --5             +1xbr_B    
                     !           +-1 
  RGTTATFTACFG   L   !         +-2 +6f59_B    
                     !         ! ! 
  RGTCSCFT--FG       +---------4 +2x6v_A    
                               ! 
  RGTC--FG--FT   L             +--5flv_I

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updated Tue Dec 17 02:29:23 2024