5t7x_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HHV-4 EBNA1 DNA BINDING DOMAIN (PATIENT-DERIVED, NASOPHARYNGEAL CARCINOMA) BOUND TO DNA
reference	Lieberman et al. Oncotarget 8 7248 2017
source	Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8) / Human herpesvirus 4 (strain B95-8)
experiment	X-ray (resolution=2.35, R-factor=?)
structural superfamily	Viral DNA-binding domain;
reference complex	5t7x_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5t7x_A interface=4,5,9,17,18,54,55,58,59,62, kggWFgkhRgqggsnpKFeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp > 5t7x_B interface=3,6,7,19,56,57,60,61,64, rkKggWFgkhrgqggsnpKfeniaeglrvllarshvertteegnwvagvfvyggsKTslYNlrRgialavpqcritplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmikpaptcnikvtvcsfddgvdlp
interface signature	WFRKFKTYNR/KWFKKTYNR

Estimated binding specificities ?

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# IC=14.736 IC/col=0.819 n_of_columns=18

specificity:

A |   1   0   0   5  90  14   2  24  24  24  24   2  14   0  96   0   0   0
C |   0   0   0   8   2  11  76  24  24  24  24   5  67   0   0   0  96  94
G |  93  96  96   2   2  63   4  24  24  24  24  87   5   0   0   0   0   2
T |   2   0   0  81   2   8  14  24  24  24  24   2  10  96   0  96   0   0

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updated Wed Jul 30 12:29:37 2025