5u0a_ACHJLN : 3D-footprint complex

structure name	CRISPR RNA-GUIDED SURVEILLANCE COMPLEX
source	THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX)
experiment	NMR
reference complex	5u07_D 5u0a_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5u0a_A interface=133,134, twltkivpdlfrtagnlhrklirlssdlgeerianprqqllfrieetrnelyllvqshsplrvdrlgpgyhqmrnldpldkgsrvryrivasptkrlgrsetqrltwlrgaaaeewwhsraaanglellstyAQddvrdpgtadrsrkirhpavrfdgeavisdvdavrhavlngigrgksygcgllslali > 5u0a_C interface=180,302,303,306,365,487,489, ppsfdvtiapwliarsrdvlaapemlglrdvlirshelsdveiplppgaavlwrilalitaritgldqppnknpkrkwqarrsqilskgrldpeavdayfadyserfdlfhperpwlqdprlreecpktsgvnklawgrtagenqvwlgghhhdldphpldsaeavwhllatlgygpsgMctarvvrgrsernvtagplrgtvsyhplgrtlfeslilnipypgtgaadlafweqpelndplglpeesaglagilrldhfrhavllhpspdgshvvdawvtwawrernispeldpyliyqtSKegRvyprpaeaeraiwrdldallhygnyrptildnctplaqvpqevldslrlrafgfdqdgQardkqwftattpavlrwladretddnenarivrritlarkaaealgrrlekackeawkesnsgpwvqhgmsrywakaepvfwnivydrpaqgytpgmagpgnafnlvalaaydevtgpyceRpRvakvverhrstlfs > 5u0a_H interface=217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsvlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa > 5u0a_J interface=1,22,25,28,29,104,126, YilqhadalvkrvsklivnepAarAalRRgvglapedprmlaahrvvapyvpvvhaverafyavaaimaaqprsardqrrpnlgvslaqavfdkglnadsteqRlhliarqnldgvhrhlprlvlYlrsdqvhidwgilirdlarwghtprhvarewvqdyhrtletltrqae > 5u0a_L interface=6,24,27,31,118, sdyilQhadalvkrvsklivnepAarAalrRgvmlaahrvvapyvpvhaverafyavaaimaaqprsardqrpnlgvslaqavfdkglnadsteqrlhliarqnldgvhrhlprlvlYlrsdqvhidwgilirdlarwghtprhvarewvqdyhrtletltrqae > 5u0a_N interface= sgfllRlagpmqswgehsmfgerDtlPypsRsgligmfaaaqgvrrgdpldrykelkftvrvdrpgvrlvdfhtiggglpkertvptaagerrdpkkativtsrsyladavftvavtGpeadtiadalaapywqpylgrrafvpdpllvlrrrvadpvrelveavplphrrveedaatvlvdliyetrtltvlndvplsfdsksrrystrqirvvptevpatlvagpgrdyqnklftyvkq
interface signature	AQ/MSKRQRR/SHMN/YAARRRY/QAARY/RDPRG

Estimated binding specificities ?

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# IC=11.137 IC/col=0.412 n_of_columns=27

specificity:

A |  13  24  24  24  24   0   0  96  96   0  24  24  96  24  24  24  24  24   0  24  24  24  24  24  16  24   0
C |  13  24  24  24  24  96   0   0   0   0  24  24   0  24  24  24  24  24   0  24  24  24  24  24  13  24  96
G |  57  24  24  24  24   0  96   0   0  96  24  24   0  24  24  24  24  24   0  24  24  24  24  24  54  24   0
T |  13  24  24  24  24   0   0   0   0   0  24  24   0  24  24  24  24  24  96  24  24  24  24  24  13  24   0

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updated Sat Dec 14 07:14:32 2024