5u0a_DEFGI : 3D-footprint complex

structure name	CRISPR RNA-GUIDED SURVEILLANCE COMPLEX
source	THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX) / THERMOBIFIDA FUSCA (STRAIN YX)
experiment	NMR
reference complex	5u07_D 5u0a_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5u0a_D interface=96,108,110,112,113,114, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgnvsvnlfgrmlaelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf > 5u0a_E interface=114,172,174,203,214,215,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkenDHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf > 5u0a_F interface=114,172,174,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfftavddipkendhgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaaf > 5u0a_G interface=114,172,174,203,215,217,219,220,221, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttvevdfFtavddipkendHgSgHMNagqfsagtfyryanvnldrlventgdaqtartavaeflraflstvpsgkqnataamtlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa > 5u0a_I interface=114,172,174, tfvdihaiqtlpysninrddlgspktvvyggkertrvssqswkravrhevearlgdkavrtrriiseiakrlrergwdadladagarqvvlsvgkksgiklekekdseapatsVlfylpvpaidelaaiadehrdavakeaakktpkgilpadritevlksrnvsvnlfgrMlAelpstevdgavqfahaftvhgttsagtfyryanvnldrlventgdaqtartavaeflraflstvpstlpdlvhiavrfdrpisfapafetalygsdgytlracqelnnyaerlrevwpddairgyatvenktdlaalgerydsypalidamvaaa
interface signature	FHSHMN/VMAFDHSHMN/VMASHMN/VMAFHSHMN/VMA

Estimated binding specificities ?

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# IC=23.567 IC/col=0.842 n_of_columns=28

specificity:

A |   0  96   0  96   0   7  24   0  96   0  96  24  24   0   0  96   7   9  24  24  24  24   0  24  68   0   0  96
C |   0   0  96   0   0  75  24  96   0  96   0  24  24   0  96   0   7   7  24  24  24  24   0  24  14   0  96   0
G |  96   0   0   0  96   7  24   0   0   0   0  24  24  96   0   0   7   7  24  24  24  24   0  24   7   0   0   0
T |   0   0   0   0   0   7  24   0   0   0   0  24  24   0   0   0  75  73  24  24  24  24  96  24   7  96   0   0

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updated Sat Dec 14 07:13:33 2024