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legend  pdf

structure nameCRYSTAL STRUCTURE OF CTCF(ZNF 4-10) WITH 28-MER DNA
referenceHorton et al. 'Mol. 66 711 2017
sourceHomo sapiens
experimentX-ray (resolution=2.55, R-factor=?)
structural superfamilybeta-beta-alpha zinc fingers;
reference complex5und_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureESKRDTYKRQTRSDV/ESKRDYKRQTRKSDVR

Estimated binding specificities ?

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# IC=29.095 IC/col=1.164 n_of_columns=25 specificity:   
A |   8   0  96   5   0  96   0   0   0   0   0   0   8   8   0   8   0   5   0   0   0   0   0   0   0
C |  75  96   0   4  96   0   0   0   0   0   0  96   8  70   0  64  96  91  96  96   0   0  87   0   0
G |   4   0   0  83   0   0  96  96  96  96  96   0  76  10  96  12   0   0   0   0   0  96   1   0  96
T |   9   0   0   4   0   0   0   0   0   0   0   0   4   8   0  12   0   0   0   0  96   0   8  96   0
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updated Sat Dec 16 06:17:08 2023