5vmw_A : 3D-footprint complex

structure name	KAISO (ZBTB33) ZINC FINGER DNA BINDING DOMAIN IN COMPLEX WITH A DOUBLE CPG-METHYLATED DNA RESEMBLING THE SPECIFIC KAISO BINDING SEQUENCE (KBS) (Transcriptional regulator Kaiso)
reference	Martinez-Yamout et al. Biochemistry 57 2109 2018
source	Homo sapiens
experiment	X-ray (resolution=2.40, R-factor=0.180)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2lt7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5vmw_A interface=27,28,31,55,56,81,82,83,115,117, ddhyelivdgrvyyicivckrsyvclTSlrRhfnihswekkypcrycekvfplaEYrtkheihhtgerryqclacgksfiNYQfmsshiksvhsqdpsgdsklyrlhpcrslqiRqYayls
interface signature	TSREYNYQRY

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# IC=7.649 IC/col=0.956 n_of_columns=8

A |   8   0   0   8   0  19   0  96
C |  11  96  96  11   0  61   8   0
G |   8   0   0   8  96   8  87   0
T |  69   0   0  69   0   8   1   0

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updated Thu Sep 12 22:09:00 2024