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3D-footprint cannot reliably estimate the specificity of 'DNA polymerase beta, N-terminal domain-like', as these often contain single-stranded DNA molecules which accumulate many base contacts which distort the calculations.


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updated Mon Dec 18 13:51:53 2023
structure nameDNA POLYMERASE BETA SUBSTRATE COMPLEX WITH INCOMING 5-FODUTP
(DNA polymerase beta)
referenceFreudenthal et al. 'Chem. 30 1993 2017
sourceHomo sapiens
experimentX-ray (resolution=1.60, R-factor=0.201)
structural superfamilyNucleotidyltransferase;DNA polymerase beta, N-terminal domain-like;PsbU/PolX domain-like;
sequence familyFingers domain of DNA polymerase lamb;
redundant complexes4rq8 4rq1 4rq3 5tb8 5tbb 5tbc 4rq7 4rq0 4rq4 4rq6 5tba 4rq2 5u2r 4rq5 5u2s 4rpy 5u2t 4rpz 5vs2 5vrz 5vs0 5vs3 5vrx 5vs1 5vs4 5vry 3v7j 3v7k 6ctm 4jwn 9ice 9icw 8ico 6cr5 4ub2 8icg 7icn 6cly 9ics 6cto 1mq3 3jpp 3rjg 1huo 4ubc 6u6b 4ub1 4m9j 5v1f 4klh 5j29 3lk9 1zjn 3rji 9icn 5v1p 4klo 4dob 4klj 6n2s 2pxi 6crc 6cr8 1zql 4klf 4r66 1zqs 9ich 6cpq 4ub4 1zqk 6n2t 3jpo 9icj 5wnx 4z6e 4ub5 8icv 2bpg 6ctj 5u9h 2i9g 5dbc 6mr8 6g2q 6uom 1zqi 6nkv 8icm 6ctq 4doc 5u8g 4kle 7ici 3rjf 8ick 7icp 5u8i 5u8h 5ugn 5dba 6bte 8icx 5wny 6uol 4klq 9icf 5j2b 5j0s 6ctw 7icq 6crb 2isp 4lvs 2fms 1zqo 8icf 1tva 1zqa 5ugo 1zqt 6ctl 4r63 5dbb 8icu 2fmq 9icu 7icj 2fmp 3mby 5v1h 5vez 4ymo 4rt3 1zqr 6e3w 4kls 7icu 1zqc 3c2k 5j0o 8icr 5v1i 3rjj 1zqj 5j0p 5ugp 4klt 1tv9 4do9 3jpt 4gxk 4f5p 4ubb 9icb 4r65 5j0q 1zqd 3jpq 4klm 4gxj 5db7 5j0u 6e3v 5db9 1zqm 8icn 6nkt 6nku 9icm 6e3r 3jpr 5eoz 6u2o 4o9m 6nkw 5j2i 6nkx 9icr 3isd 8icl 6bel 6nky 6cr4 4r64 1zqe 5tzv 3jps 6n2r 4m9l 4f5r 9ici 6cr3 6ctk 1bpy 9ica 6bem 8icy 5j0x 6cu9 4kli 9ico 2bpf 6cti 1bpz 5db8 9icx 6nl0 4uaz 5v1j 5v1g 7icm 4m9n 9icc 7icf 5v1o 9icl 4f5q 3rh5 6ph5 1zqg 6ph6 9icy 8ich 3rh6 7ict 5wnz 7ich 6nkr 1zqq 6ctx 7icr 5j2k 4f5o 8ice 1zqh 4uay 4ub3 6cua 5bol 5v1n 3tfr 3c2m 2p66 5j0r 5j2j 6crh 6ctn 3v72 6pkz 6cr6 6w2m 4ppx 6uok 5j2d 4gxi 8ica 7ico 4yn4 5j2g 3rje 1zqn 3jpn 4jwm 6ctr 3rh4 3uxp 2iso 9ict 6dic 8icb 3rjk 4klg 1zqb 5bom 8ict 6cub 4m9g 4ymm 4ymn 7ick 6cr9 8icw 4uaw 1bpx 3isc 8icz 1mq2 9icp 3c2l 3tfs 4klu 6mr7 4z6f 7icg 4rt2 4kll 8icj 9icv 6e3x 6ctu 5j2f 8icc 6dia 6ctv 3isb 6cr7 4z6d 4m9h 8icp 7icv 5j2c 6nkz 7ics 6nks 5j0y 5j2h 3ogu 5v1r 1zjm 1zqf 9icq 3rjh 8ici 9ick 5db6 9icg 8icq 1zqp 7icl 4f5n 4z6c 5j0t 1huz 5j2a 8ics 5j0w 5bpc 7ice 4doa 5j2e 6ctt 4phe 4nlk 4nlz 4nm1 4tur 4pgq 4mf8 4tup 4o5c 4nln 4o5e 4nm2 4phd 4pgy 5hhi 4pha 5hhh 3gdx 4tus 4ny8 4pgx 4tuq 4o5k 4nxz 4php 4ph5 4p2h 4m2y 4mfa 4mff 4mfc 4mf2 4m47
reference complex4kli_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence