interface graph thumbnail
legend  pdf

structure nameLARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS IN A CLOSED TERNARY COMPLEX WITH THE NATURAL BASE PAIR 5FC:DGTP
(DNA polymerase I, thermostable)
referenceMondal et al. 'Angew. 58 130 2019
sourceThermus aquaticus
experimentX-ray (resolution=2.00, R-factor=0.198)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNH

Estimated binding specificities ?

contactlogo
# IC=2.750 IC/col=0.688 n_of_columns=4 specificity:   
A |   8   8   0   8
C |  10  72   0  72
G |  61   8  96   8
T |  17   8   0   8
scan!

home
updated Fri Jan 9 05:03:42 2026