5ytf_A : 3D-footprint complex

structure name	STRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE M-FC PAIR WITH DA (DNA polymerase I, thermostable)
reference	Mondal et al. 'Angew. 58 130 2019
source	Thermus aquaticus
experiment	X-ray (resolution=1.98, R-factor=0.183)
structural superfamily	DNA/RNA polymerases;Ribonuclease H-like;
sequence family	DNA polymerase family A; Taq polymerase, exonuclease;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ytf_A interface=247,251,280,287,290,461,491, leeapwpppegafvgfvlsrkepmwadllalaaarggrvhrapepykalrdlkeargllakdlsvlalreglglppgddpmllaylldpsnttpegvarryggewteeageraalserlfanlwgrlegeerllwlyreverplsavlahmeatgvrldvaylralslevaeeiarleaevfrlaghpfnlnsrdqlervlfdelglpaigktektgkrstsaavlealreahpivekilqyreltKlksTyidplpdlihprtgrlhtrfnqtatatgRlsssdpNlqNipvrtplgqrirrafiaeegwllvaldysqielrvlahlsgdenlirvfqegrdihtetaswmfgvpreavdplmrraaktinfgvlygmsahrlsqelaipyeeaqafieryfqsfpkvrawiektleegrrrgyvetlfgrrryvpdlearvksvreaaermafnmpvQgtaadlmklamvklfprleemgarmllqvHdelvleapkeraeavarlakevmegvyplavplevevgigedwlsake
interface signature	KTRNNQH

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# IC=2.849 IC/col=0.712 n_of_columns=4

A |   8   8   0   8
C |  16  80   0  72
G |  48   8  96   8
T |  24   0   0   8

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updated Tue Dec 17 03:03:20 2024