interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE I-FC PAIR WITH DA
(DNA polymerase I, thermostable)
referenceMondal et al. 'Angew. 58 130 2019
sourceThermus aquaticus
experimentX-ray (resolution=2.07, R-factor=0.201)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNH

Estimated binding specificities ?

readout + contactlogo
# IC=2.755 IC/col=0.689 n_of_columns=4 specificity:   
A |   9   0  11   9
C |  11  96   9  57
G |  67   0  76  11
T |   9   0   0  19
scan!

home
updated Sat Aug 2 10:04:25 2025