interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE M-FC PAIR WITH DG
(DNA polymerase I, thermostable)
referenceMondal et al. 'Angew. 58 130 2019
sourceThermus aquaticus
experimentX-ray (resolution=2.53, R-factor=0.207)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRNNQH

Estimated binding specificities ?

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# IC=3.029 IC/col=0.757 n_of_columns=4 specificity:   
A |   8   8   0   8
C |  17  69   0  88
G |  45  11  96   0
T |  26   8   0   0
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updated Fri Jan 9 05:04:34 2026