interface graph thumbnail
legend  pdf

structure nameATVAL1 B3 DOMAIN IN COMPLEX WITH 13BP-DNA
(B3 domain-containing transcription repressor VAL1)
referenceZhang et al. 'Biochem. ? ? 2018
sourceArabidopsis thaliana
experimentX-ray (resolution=2.61, R-factor=0.212)
structural superfamilyDNA-binding pseudobarrel domain;
sequence familyB3 DNA binding domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSIRVWNNM

Estimated binding specificities ?

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# IC=5.807 IC/col=0.968 n_of_columns=6 specificity:   
A |  13  96   0   0   0  54
C |  57   0   0   0  96  13
G |  13   0   0  96   0  13
T |  13   0  96   0   0  16
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updated Tue Dec 17 03:06:46 2024