interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS HOST-GUEST COMPLEX WITH THE UNNATURAL BASE 5FC PAIR WITH DA
(DNA polymerase I, thermostable)
referenceMondal et al. 'Angew. 58 130 2019
sourceThermus aquaticus
experimentX-ray (resolution=1.91, R-factor=0.186)
structural superfamilyDNA/RNA polymerases;Ribonuclease H-like;
sequence familyDNA polymerase family A; Taq polymerase, exonuclease;
reference complex6fbc_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKTRNNQH

Estimated binding specificities ?

readout + contactlogo
# IC=2.674 IC/col=0.669 n_of_columns=4 specificity:   
A |  11   9   0  11
C |   9  69   0  67
G |  67   9  96   9
T |   9   9   0   9
scan!

home
updated Fri Jan 9 05:12:32 2026