5zd4_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF MBP-FUSED BIL1/BZR1 IN COMPLEX WITH DOUBLE- STRANDED DNA
reference	Hirabayashi et al. 'Nat 4 771 2018
source	ESCHERICHIA COLI O157:H7, ARABIDOPSIS THALIANA
experiment	X-ray (resolution=2.17, R-factor=?)
structural superfamily	Periplasmic binding protein-like II;
reference complex	7vn3_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5zd4_C interface=371,377,381,384,385,388,389, kieegklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllaeitpaaafqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr > 5zd4_D interface=346,352,356,359,360,363,364, viwingdkgynglaevgkkfvehpdkleekfpqvaatgdgpdiifwahdrfggyaqsgllqdklypftwdavryngkliaypiavealsliynkdllpnppktweeipaldkelkakgksalmfnlqepyftwpliaadggyafkyaagkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtsavnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdaalaaaqtnaarRkpswrErenNrrRErrRRavaakiytglraqgdynlpkhcdnnevlkalcveagwvveedgttyr
interface signature	RENRERR/RENRERR

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# IC=5.605 IC/col=0.701 n_of_columns=8

A |   9  24   9  52   0   0   9   4
C |  72  24  79  26  96   0   9   0
G |   6  24   3   9   0  96  26  92
T |   9  24   5   9   0   0  52   0

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updated Sat Dec 14 09:20:11 2024